Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rho-binding antiterminator | NCTC13639_04648 | Not Available | Positive | 4289863 - 4290123 | 9589.35 |
| trna(ile)-lysidine synthase | NCTC13639_04649 | Not Available | Negative | 4290187 - 4291395 | 45190.2 |
| putative lyase | NCTC13639_04650 | Not Available | Negative | 4291542 - 4291856 | 12072.4 |
| lysine decarboxylase, constitutive | NCTC13639_04651 | Not Available | Negative | 4291999 - 4294137 | 80425.5 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | NCTC13639_04652 | Not Available | Negative | 4294237 - 4295196 | 35301.6 |
| dna polymerase iii subunit alpha | NCTC13639_04653 | Not Available | Negative | 4295209 - 4298691 | 130159.0 |
| ribonuclease hii | NCTC13639_04654 | Not Available | Negative | 4298716 - 4299312 | 21437.1 |
| lipid-a-disaccharide synthase | NCTC13639_04655 | Not Available | Negative | 4299309 - 4300457 | 42444.1 |
| acyl-acp-udp-n- acetylglucosamine o-acyltransferase | NCTC13639_04656 | Not Available | Negative | 4300457 - 4301245 | 28223.8 |
| (3r)-hydroxymyristoyl-acp dehydratase | NCTC13639_04657 | Not Available | Negative | 4301249 - 4301704 | 17043.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

