Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dl-methionine transporter permease subunit | NCTC13639_04638 | Not Available | Positive | 4283181 - 4283834 | 23292.6 |
| dl-methionine transporter substrate-binding subunit | NCTC13639_04639 | Not Available | Positive | 4283879 - 4284694 | 29433.3 |
| outer membrane lipoprotein | NCTC13639_04640 | Not Available | Positive | 4284810 - 4285214 | 14113.2 |
| putative methyltransferase, yaeb/af_0241 family | NCTC13639_04641 | Not Available | Positive | 4285211 - 4285918 | 26645.0 |
| prolyl-trna synthetase | NCTC13639_04642 | Not Available | Positive | 4286032 - 4287474 | 53147.5 |
| prolyl-trna synthetase | NCTC13639_04643 | Not Available | Positive | 4287471 - 4287749 | 10682.0 |
| lipoprotein involved with copper homeostasis and adhesion | NCTC13639_04644 | Not Available | Negative | 4287794 - 4288489 | 25577.5 |
| peptidyl-trna hydrolase domain protein | NCTC13639_04645 | Not Available | Negative | 4288523 - 4288945 | 15624.9 |
| uncharacterized protein conserved in bacteria | NCTC13639_04646 | Not Available | Negative | 4288942 - 4289487 | 20878.7 |
| uncharacterised protein family (upf0253) | NCTC13639_04647 | Not Available | Positive | 4289676 - 4289876 | 7194.58 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

