Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase d | NCTC13639_04624 | Not Available | Positive | 4269641 - 4270861 | 44672.5 |
| methyltransferase | NCTC13639_04625 | Not Available | Negative | 4270912 - 4271682 | 28196.2 |
| uncharacterized protein conserved in bacteria | NCTC13639_04626 | Not Available | Negative | 4271759 - 4272538 | 29077.2 |
| major facilitator superfamily protein | NCTC13639_04627 | Not Available | Negative | 4272691 - 4273866 | 40607.2 |
| lysr family transcriptional regulator | NCTC13639_04628 | Not Available | Positive | 4273971 - 4274879 | 33762.9 |
| 2,5-diketo-d-gluconate reductase b | NCTC13639_04629 | Not Available | Negative | 4274907 - 4275710 | 29122.1 |
| Trna-asp | Not Available | Not Available | Positive | 4275875 - 4275951 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 4279334 - 4279409 | Not Available |
| d,d-heptose 1,7-bisphosphate phosphatase | NCTC13639_04636 | Not Available | Negative | 4281401 - 4281967 | 21008.1 |
| dl-methionine transporter atp-binding subunit | NCTC13639_04637 | Not Available | Positive | 4282157 - 4283188 | 37771.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

