Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | NCTC13639_04604 | Not Available | Positive | 4251307 - 4253751 | 89205.7 |
| carbon-nitrogen hydrolase | NCTC13639_04605 | Not Available | Positive | 4253862 - 4254629 | 29112.6 |
| periplasmic protein | NCTC13639_04606 | Not Available | Positive | 4254810 - 4255220 | 15262.4 |
| predicted signal transduction protein containing sensor and eal domains | NCTC13639_04607 | Not Available | Negative | 4255236 - 4255457 | 8299.03 |
| eal domain | NCTC13639_04608 | Not Available | Negative | 4255441 - 4255956 | 19913.5 |
| lipid a core - o-antigen ligase and related enzymes | NCTC13639_04609 | Not Available | Negative | 4255958 - 4257622 | 62063.8 |
| fimbrial subunit | NCTC13639_04610 | Not Available | Negative | 4257627 - 4258169 | 19337.8 |
| fimbrial adhesin | NCTC13639_04611 | Not Available | Negative | 4258179 - 4259243 | 38209.9 |
| fimbrial subunit | NCTC13639_04612 | Not Available | Negative | 4259240 - 4259845 | 22056.7 |
| fimbrial chaperone protein | NCTC13639_04613 | Not Available | Negative | 4259858 - 4260646 | 28993.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

