Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar p-ring addition protein | NCTC13639_04577 | Not Available | Positive | 4225375 - 4226145 | 27758.9 |
| flagellar anti-sigma factor 28 protein | NCTC13639_04578 | Not Available | Positive | 4226242 - 4226529 | 10046.5 |
| flagellar chaperone protein | NCTC13639_04579 | Not Available | Positive | 4226542 - 4226970 | 16739.1 |
| flagellar associated protein | NCTC13639_04580 | Not Available | Positive | 4227104 - 4228048 | 35974.1 |
| putative glycosyl transferase | NCTC13639_04581 | Not Available | Positive | 4228105 - 4230666 | 97551.6 |
| cdp-glycerol:poly(glycerophosphate) glycerophosphotransferase | NCTC13639_04582 | Not Available | Positive | 4230695 - 4231891 | 46102.5 |
| sialyltransferase pmo188 | NCTC13639_04583 | Not Available | Positive | 4231944 - 4233113 | 44434.1 |
| glycerol-3-phosphate cytidylyltransferase | NCTC13639_04584 | Not Available | Negative | 4233186 - 4233578 | 14853.0 |
| uncharacterised protein | NCTC13639_04585 | Not Available | Negative | 4233619 - 4234299 | 26043.2 |
| flagellar export/assembly protein | NCTC13639_04586 | Not Available | Negative | 4234337 - 4234771 | 16304.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

