Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ninx | NCTC13639_03399 | Not Available | Positive | 3092354 - 3092764 | 15118.9 |
| Hypothetical protein | NCTC13639_03400 | Not Available | Positive | 3092727 - 3092966 | 9247.97 |
| Hypothetical protein | NCTC13639_03401 | Not Available | Positive | 3092976 - 3093281 | 11256.2 |
| uncharacterised protein | NCTC13639_03402 | Not Available | Positive | 3093389 - 3093625 | 8973.87 |
| Integrase | NCTC13639_03403 | Not Available | Negative | 3093583 - 3094791 | 45796.5 |
| Attr | Not Available | Not Available | Positive | 3094972 - 3094994 | Not Available |
| Attl | Not Available | Not Available | Positive | 4884402 - 4884415 | Not Available |
| Replicative dna helicase | NCTC13639_05256 | Not Available | Negative | 4888338 - 4889030 | 26091.3 |
| Ban | NCTC13639_05257 | Not Available | Negative | 4888993 - 4889754 | 27767.6 |
| quinone oxidoreductase, nadph-dependent | NCTC13639_05258 | Not Available | Positive | 4889819 - 4890802 | 34928.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

