Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | NCTC13639_04537 | Not Available | Negative | 4189779 - 4190678 | 32695.2 |
| fimbrial usher protein | NCTC13639_04538 | Not Available | Negative | 4190683 - 4193175 | 91253.0 |
| fimbrial protein | NCTC13639_04539 | Not Available | Negative | 4193234 - 4193911 | 24824.9 |
| fimbrial protein | NCTC13639_04540 | Not Available | Negative | 4193964 - 4194551 | 20173.1 |
| fumarate/nitrate reduction transcriptional regulator | NCTC13639_04541 | Not Available | Negative | 4195147 - 4195866 | 27097.9 |
| gamma-glutamyl phosphate reductase | NCTC13639_04542 | Not Available | Negative | 4196137 - 4197372 | 44239.3 |
| gamma-glutamyl kinase | NCTC13639_04543 | Not Available | Negative | 4197403 - 4198506 | 39072.9 |
| outer membrane phosphoporin protein e | NCTC13639_04544 | Not Available | Positive | 4198796 - 4199851 | 38866.9 |
| dna-binding transcriptional regulator crl | NCTC13639_04545 | Not Available | Negative | 4199908 - 4200057 | 5656.84 |
| dna-binding transcriptional regulator crl | NCTC13639_04546 | Not Available | Negative | 4200101 - 4200310 | 7881.66 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

