Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin yafw | NCTC13639_04527 | Not Available | Positive | 4183289 - 4183606 | 12095.4 |
| toxin ykfi | NCTC13639_04528 | Not Available | Positive | 4183627 - 4183968 | 12921.8 |
| uncharacterised protein | NCTC13639_04529 | Not Available | Positive | 4184084 - 4184182 | 3566.27 |
| Trna-thr | Not Available | Not Available | Positive | 4184358 - 4184433 | Not Available |
| putative protein-s-isoprenylcysteine methyltransferase | NCTC13639_04531 | Not Available | Negative | 4184598 - 4185062 | 17554.1 |
| signal transduction protein | NCTC13639_04532 | Not Available | Negative | 4185255 - 4186703 | 55468.8 |
| uncharacterised protein | NCTC13639_04533 | Not Available | Negative | 4187045 - 4187518 | 17889.8 |
| transcriptional regulator | NCTC13639_04534 | Not Available | Negative | 4187493 - 4188224 | 27121.2 |
| fimbrial protein | NCTC13639_04535 | Not Available | Negative | 4188369 - 4189064 | 26326.8 |
| fimbrial protein | NCTC13639_04536 | Not Available | Negative | 4189061 - 4189813 | 26974.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

