Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerc | NCTC13639_04496 | Not Available | Positive | 4154335 - 4155642 | 49341.3 |
| uncharacterised protein | NCTC13639_04497 | Not Available | Positive | 4155765 - 4156214 | 16424.6 |
| uncharacterised protein | NCTC13639_04498 | Not Available | Positive | 4156567 - 4157331 | 28892.9 |
| uncharacterised protein | NCTC13639_04499 | Not Available | Positive | 4157414 - 4157590 | 6480.9 |
| protein of uncharacterised function (duf3296) | NCTC13639_04500 | Not Available | Positive | 4157793 - 4158413 | 24035.4 |
| uncharacterised protein | NCTC13639_04501 | Not Available | Negative | 4158469 - 4159125 | 24947.1 |
| maltose o-acetyltransferase | NCTC13639_04502 | Not Available | Negative | 4159154 - 4159462 | 11783.3 |
| aminoimidazole riboside kinase | NCTC13639_04503 | Not Available | Positive | 4160371 - 4161294 | 32956.5 |
| maltoporin | NCTC13639_04504 | Not Available | Positive | 4161460 - 4162977 | 55651.6 |
| pts system trehalose(maltose)-specific transporter subunits iibc | NCTC13639_04505 | Not Available | Positive | 4163115 - 4164485 | 47983.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

