Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase | NCTC13639_04477 | Not Available | Positive | 4133733 - 4135220 | 53621.6 |
| gamma-glutamylputrescine oxidoreductase | NCTC13639_04478 | Not Available | Positive | 4135223 - 4135996 | 28299.4 |
| gamma-glutamylputrescine oxidoreductase | NCTC13639_04479 | Not Available | Positive | 4135972 - 4136502 | 19919.1 |
| hydrogenase 2 small subunit | NCTC13639_04480 | Not Available | Positive | 4136830 - 4137840 | 36661.8 |
| hydrogenase 2 large subunit | NCTC13639_04481 | Not Available | Positive | 4137837 - 4139630 | 66471.5 |
| probable ni/fe-hydrogenase 1 b-type cytochrome subunit | NCTC13639_04482 | Not Available | Positive | 4139649 - 4140383 | 28277.5 |
| hydrogenase 2 maturation endopeptidase | NCTC13639_04483 | Not Available | Positive | 4140380 - 4140874 | 17490.5 |
| hydrogenase-1 operon protein hyae | NCTC13639_04484 | Not Available | Positive | 4140968 - 4141372 | 15345.4 |
| huph hydrogenase expression protein, c-terminal conserved region | NCTC13639_04485 | Not Available | Positive | 4141369 - 4142226 | 31392.3 |
| cytochrome d ubiquinol oxidase subunit 1 | NCTC13639_04486 | Not Available | Positive | 4142315 - 4143859 | 58254.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

