Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase t | NCTC13639_04467 | Not Available | Negative | 4120701 - 4121516 | 29352.7 |
| uncharacterized protein conserved in bacteria | NCTC13639_04468 | Not Available | Positive | 4122835 - 4123092 | 9626.72 |
| dna methyltransferase | NCTC13639_04469 | Not Available | Positive | 4123103 - 4123849 | 27503.7 |
| general stress protein | NCTC13639_04470 | Not Available | Negative | 4123906 - 4124469 | 20377.3 |
| agmatine deiminase | NCTC13639_04471 | Not Available | Positive | 4124873 - 4125985 | 40558.1 |
| signal transduction protein | NCTC13639_04472 | Not Available | Positive | 4126489 - 4128711 | 84039.0 |
| putrescine importer | NCTC13639_04473 | Not Available | Negative | 4128884 - 4130272 | 50611.5 |
| gamma-glutamylputrescine synthetase | NCTC13639_04474 | Not Available | Negative | 4130616 - 4132034 | 52995.0 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | NCTC13639_04475 | Not Available | Positive | 4132247 - 4133011 | 27860.3 |
| transcriptional regulator of the polyamine metabolism genes | NCTC13639_04476 | Not Available | Positive | 4133037 - 4133594 | 20007.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

