Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrichrome-iron tonb-dependent receptor | NCTC13639_04457 | Not Available | Negative | 4112529 - 4114619 | 77771.6 |
| arac family transcriptional regulator | NCTC13639_04458 | Not Available | Negative | 4114759 - 4115742 | 36941.3 |
| dna-binding transcriptional activator gcva | NCTC13639_04459 | Not Available | Negative | 4115867 - 4116772 | 33372.1 |
| homoserine/homoserine lactone efflux protein | NCTC13639_04460 | Not Available | Positive | 4116882 - 4117349 | 16332.2 |
| uncharacterised protein | NCTC13639_04461 | Not Available | Negative | 4117614 - 4117850 | 8905.75 |
| protein of uncharacterised function (duf2913) | NCTC13639_04462 | Not Available | Negative | 4117947 - 4118576 | 24606.8 |
| c4-dicarboxylate transporter dcuc | NCTC13639_04463 | Not Available | Negative | 4118899 - 4119699 | 28019.3 |
| c4-dicarboxylate transporter dcuc | NCTC13639_04464 | Not Available | Negative | 4119710 - 4120261 | 19908.0 |
| peptidase t | NCTC13639_04465 | Not Available | Negative | 4120258 - 4120452 | 6960.21 |
| peptidase t | NCTC13639_04466 | Not Available | Negative | 4120436 - 4120636 | 7484.96 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

