Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | NCTC13639_04437 | Not Available | Negative | 4090559 - 4091035 | 17724.4 |
| protein of uncharacterised function (duf2543) | NCTC13639_04438 | Not Available | Negative | 4091122 - 4091367 | 9311.65 |
| metal-dependent hydrolase | NCTC13639_04439 | Not Available | Positive | 4091745 - 4092521 | 28593.2 |
| arac family transcriptional regulator | NCTC13639_04440 | Not Available | Positive | 4092540 - 4093490 | 35385.2 |
| uncharacterised protein | NCTC13639_04441 | Not Available | Negative | 4093368 - 4093724 | 12862.6 |
| trans-aconitate 2-methyltransferase | NCTC13639_04442 | Not Available | Negative | 4093708 - 4094097 | 14237.8 |
| lac repressor | NCTC13639_04443 | Not Available | Positive | 4094244 - 4095344 | 39327.5 |
| beta-d-galactosidase | NCTC13639_04444 | Not Available | Positive | 4095466 - 4098549 | 116840.0 |
| lactose permease | NCTC13639_04445 | Not Available | Positive | 4098601 - 4099854 | 46520.0 |
| lipoprotein | NCTC13639_04446 | Not Available | Positive | 4100007 - 4100279 | 10025.8 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

