Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | NCTC13639_04427 | Not Available | Negative | 4081540 - 4082553 | 36517.7 |
| acetaldehyde dehydrogenase | NCTC13639_04428 | Not Available | Negative | 4082550 - 4083500 | 33162.3 |
| 2-keto-4-pentenoate hydratase | NCTC13639_04429 | Not Available | Negative | 4083497 - 4084306 | 28957.5 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | NCTC13639_04430 | Not Available | Negative | 4084316 - 4085182 | 32040.3 |
| extradiol dioxygenase | NCTC13639_04431 | Not Available | Negative | 4085211 - 4086155 | 33993.7 |
| monooxygenase | NCTC13639_04432 | Not Available | Negative | 4086157 - 4087821 | 61829.8 |
| transcriptional repressor iclr | NCTC13639_04433 | Not Available | Positive | 4087974 - 4088669 | 26390.0 |
| antibiotic biosynthesis monooxygenase | NCTC13639_04434 | Not Available | Positive | 4088962 - 4089267 | 11846.2 |
| uncharacterised protein | NCTC13639_04435 | Not Available | Positive | 4089287 - 4089808 | 19674.4 |
| uncharacterised protein | NCTC13639_04436 | Not Available | Negative | 4089891 - 4090322 | 16491.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

