Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase | NCTC13639_04417 | Not Available | Positive | 4070383 - 4071924 | 58092.4 |
| regulatory protein | NCTC13639_04418 | Not Available | Positive | 4072010 - 4072864 | 32070.2 |
| regulatory protein | NCTC13639_04419 | Not Available | Positive | 4072824 - 4073315 | 17168.8 |
| iron abc transporter substrate-binding protein | NCTC13639_04420 | Not Available | Positive | 4073312 - 4074343 | 37514.6 |
| ferric abc transporter permease | NCTC13639_04421 | Not Available | Positive | 4074912 - 4075382 | 16984.3 |
| ferric abc transporter permease | NCTC13639_04422 | Not Available | Positive | 4075387 - 4076493 | 39894.4 |
| ferric transporter atp-binding subunit | NCTC13639_04423 | Not Available | Positive | 4076505 - 4077551 | 39226.2 |
| homocysteine methyltransferase | NCTC13639_04424 | Not Available | Negative | 4077660 - 4078592 | 33520.6 |
| lysine transporter | NCTC13639_04425 | Not Available | Negative | 4078579 - 4079982 | 50530.7 |
| major facilitator superfamily transporter | NCTC13639_04426 | Not Available | Negative | 4080257 - 4081471 | 41636.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

