Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | NCTC13639_04407 | Not Available | Positive | 4059663 - 4060820 | 41591.1 |
| putative dna-binding transcriptional regulator | NCTC13639_04408 | Not Available | Negative | 4060822 - 4061445 | 23707.8 |
| outer membrane autotransporter | NCTC13639_04409 | Not Available | Negative | 4061535 - 4064459 | 104130.0 |
| delta-aminolevulinic acid dehydratase | NCTC13639_04410 | Not Available | Positive | 4064968 - 4065951 | 35852.0 |
| taurine dioxygenase | NCTC13639_04411 | Not Available | Negative | 4066001 - 4066849 | 32358.3 |
| taurine abc transporter permease | NCTC13639_04412 | Not Available | Negative | 4066846 - 4067676 | 29662.6 |
| taurine transporter atp-binding subunit | NCTC13639_04413 | Not Available | Negative | 4067673 - 4068440 | 28057.2 |
| taurine transporter substrate binding subunit | NCTC13639_04414 | Not Available | Negative | 4068455 - 4069090 | 23158.6 |
| taurine transporter substrate binding subunit | NCTC13639_04415 | Not Available | Negative | 4069071 - 4069418 | 11861.0 |
| two-component system response regulator protein | NCTC13639_04416 | Not Available | Positive | 4069607 - 4070383 | 28284.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

