Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein | NCTC13639_04397 | Not Available | Negative | 4051104 - 4051424 | 11809.4 |
| alkaline phosphatase | NCTC13639_04398 | Not Available | Negative | 4051522 - 4052937 | 49381.2 |
| anti-adapter protein irap | NCTC13639_04399 | Not Available | Negative | 4053042 - 4053284 | 9266.4 |
| efflux pump | NCTC13639_04400 | Not Available | Negative | 4053533 - 4054729 | 42834.9 |
| d-alanyl-alanine synthetase a | NCTC13639_04401 | Not Available | Positive | 4055013 - 4056125 | 40009.8 |
| protein of uncharacterised function (duf2754) | NCTC13639_04402 | Not Available | Negative | 4056149 - 4056367 | 8310.18 |
| inner membrane protein yaiy | NCTC13639_04403 | Not Available | Positive | 4056632 - 4056955 | 11825.5 |
| lipoprotein | NCTC13639_04404 | Not Available | Negative | 4056940 - 4058043 | 40472.6 |
| transport protein | NCTC13639_04405 | Not Available | Negative | 4058059 - 4059117 | 40631.8 |
| uncharacterised protein | NCTC13639_04406 | Not Available | Negative | 4059105 - 4059278 | 6642.12 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

