Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein conserved in bacteria | NCTC13639_04377 | Not Available | Negative | 4028626 - 4029171 | 20734.6 |
| isochorismatase | NCTC13639_04378 | Not Available | Negative | 4029345 - 4029968 | 23082.6 |
| lysr family transcriptional regulator | NCTC13639_04379 | Not Available | Positive | 4030261 - 4031163 | 33386.2 |
| maltodextrin glucosidase | NCTC13639_04380 | Not Available | Negative | 4031157 - 4032974 | 68664.7 |
| putative proline-specific permease | NCTC13639_04381 | Not Available | Negative | 4033113 - 4034486 | 50212.8 |
| branched chain amino acid transport system ii carrier protein | NCTC13639_04382 | Not Available | Negative | 4034568 - 4035887 | 46251.8 |
| phosphate regulon two-component system, sensor kinase | NCTC13639_04383 | Not Available | Negative | 4036293 - 4037588 | 49641.2 |
| transcriptional regulator phob | NCTC13639_04384 | Not Available | Negative | 4037639 - 4038328 | 26491.0 |
| exonuclease subunit sbcd | NCTC13639_04385 | Not Available | Positive | 4038519 - 4039721 | 44513.7 |
| exonuclease subunit sbcc | NCTC13639_04386 | Not Available | Positive | 4039718 - 4042861 | 118651.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

