Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor family transcriptional regulator | NCTC13639_04367 | Not Available | Negative | 4018455 - 4019147 | 26575.9 |
| predicted enzyme related to lactoylglutathione lyase | NCTC13639_04368 | Not Available | Negative | 4019171 - 4019536 | 13044.5 |
| preprotein translocase subunit secf | NCTC13639_04369 | Not Available | Negative | 4019705 - 4020676 | 35299.5 |
| protein-export protein | NCTC13639_04370 | Not Available | Negative | 4020687 - 4022501 | 65112.1 |
| preprotein translocase subunit yajc | NCTC13639_04371 | Not Available | Negative | 4022614 - 4022895 | 10068.4 |
| queuine trna-ribosyltransferase | NCTC13639_04372 | Not Available | Negative | 4022918 - 4024045 | 42540.0 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | NCTC13639_04373 | Not Available | Negative | 4024101 - 4025171 | 39430.1 |
| acyl carrier protein phosphodiesterase | NCTC13639_04374 | Not Available | Positive | 4025262 - 4025843 | 23188.6 |
| peroxidase | NCTC13639_04375 | Not Available | Positive | 4026012 - 4026614 | 22264.5 |
| n-substituted formamide deformylase precursor | NCTC13639_04376 | Not Available | Negative | 4026736 - 4028604 | 69168.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

