Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | NCTC13639_04357 | Not Available | Positive | 4012115 - 4012375 | 9389.13 |
| phosphatidylglycerophosphatase a | NCTC13639_04358 | Not Available | Negative | 4012445 - 4012963 | 19452.2 |
| thiamine monophosphate kinase | NCTC13639_04359 | Not Available | Negative | 4012941 - 4013918 | 34894.4 |
| transcription antitermination protein nusb | NCTC13639_04360 | Not Available | Negative | 4013996 - 4014415 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | NCTC13639_04361 | Not Available | Negative | 4014435 - 4014905 | 16143.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase | NCTC13639_04362 | Not Available | Negative | 4014996 - 4015367 | 13514.5 |
| riboflavin biosynthesis protein | NCTC13639_04363 | Not Available | Negative | 4015399 - 4016100 | 24795.8 |
| transcriptional repressor | NCTC13639_04364 | Not Available | Negative | 4016104 - 4016553 | 17212.9 |
| lipoprotein | NCTC13639_04365 | Not Available | Positive | 4016707 - 4017246 | 19557.4 |
| nucleoside-specific channel-forming protein | NCTC13639_04366 | Not Available | Positive | 4017546 - 4018409 | 32708.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

