Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydropantoate 2-reductase | NCTC13639_04347 | Not Available | Positive | 4004024 - 4004935 | 33887.7 |
| dj-1 family protein | NCTC13639_04348 | Not Available | Positive | 4004898 - 4005488 | 20856.2 |
| protein of uncharacterised function (duf3298) | NCTC13639_04349 | Not Available | Positive | 4005521 - 4006603 | 40327.6 |
| thiamine biosynthesis protein thii | NCTC13639_04350 | Not Available | Negative | 4006669 - 4007259 | 22384.6 |
| thiamine biosynthesis protein thii | NCTC13639_04351 | Not Available | Negative | 4007201 - 4008118 | 34642.9 |
| exodeoxyribonuclease vii small subunit | NCTC13639_04352 | Not Available | Positive | 4008315 - 4008557 | 8894.39 |
| geranyltranstransferase | NCTC13639_04353 | Not Available | Positive | 4008558 - 4009457 | 32063.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | NCTC13639_04354 | Not Available | Positive | 4009482 - 4010279 | 29239.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | NCTC13639_04355 | Not Available | Positive | 4010240 - 4011343 | 39998.6 |
| aldo/keto reductase | NCTC13639_04356 | Not Available | Positive | 4011400 - 4012101 | 26303.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

