Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized lipoprotein | NCTC13639_04337 | Not Available | Positive | 3994340 - 3994918 | 20811.1 |
| muropeptide transporter | NCTC13639_04338 | Not Available | Positive | 3994963 - 3996438 | 53627.9 |
| cytochrome o ubiquinol oxidase subunit 2 | NCTC13639_04339 | Not Available | Positive | 3996897 - 3997844 | 34983.3 |
| cytochrome o ubiquinol oxidase subunit 1 | NCTC13639_04340 | Not Available | Positive | 3997864 - 3998505 | 23678.5 |
| cytochrome o ubiquinol oxidase subunit 1 | NCTC13639_04341 | Not Available | Positive | 3998528 - 3999856 | 50020.5 |
| cytochrome o ubiquinol oxidase subunit iii | NCTC13639_04342 | Not Available | Positive | 3999846 - 4000460 | 22627.9 |
| cytochrome o ubiquinol oxidase subunit iv | NCTC13639_04343 | Not Available | Positive | 4000460 - 4000789 | 11977.2 |
| protoheme ix farnesyltransferase | NCTC13639_04344 | Not Available | Positive | 4000801 - 4001691 | 32475.7 |
| major facilitator superfamily transporter | NCTC13639_04345 | Not Available | Positive | 4001913 - 4003277 | 48871.4 |
| putative nucleotide-binding protein | NCTC13639_04346 | Not Available | Negative | 4003358 - 4003849 | 18369.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

