Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| queuosine biosynthesis protein quec | NCTC13639_04326 | Not Available | Positive | 3982805 - 3983500 | 25399.4 |
| acyl-coa thioester hydrolase | NCTC13639_04327 | Not Available | Negative | 3983618 - 3984016 | 15100.1 |
| dna uptake protein | NCTC13639_04328 | Not Available | Negative | 3984119 - 3984493 | 12937.6 |
| peptidyl-prolyl cis-trans isomerase (rotamase d) | NCTC13639_04329 | Not Available | Negative | 3984640 - 3986514 | 67933.2 |
| dna-binding protein hu-beta | NCTC13639_04330 | Not Available | Negative | 3986782 - 3987054 | 9196.06 |
| atp-dependent protease la | NCTC13639_04331 | Not Available | Negative | 3987263 - 3989617 | 87367.2 |
| atp-dependent protease atp-binding subunit clpx | NCTC13639_04333 | Not Available | Negative | 3989802 - 3991076 | 46264.6 |
| atp-dependent clp protease proteolytic subunit | NCTC13639_04334 | Not Available | Negative | 3991203 - 3991826 | 23202.0 |
| trigger factor | NCTC13639_04335 | Not Available | Negative | 3992075 - 3993373 | 47993.1 |
| transcriptional regulator bola | NCTC13639_04336 | Not Available | Negative | 3993717 - 3994034 | 11967.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

