Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_04316 | Not Available | Negative | 3971118 - 3971687 | 19433.3 |
| acyl-coa thioesterase ii | NCTC13639_04317 | Not Available | Positive | 3971900 - 3972760 | 32258.5 |
| ammonium transporter | NCTC13639_04318 | Not Available | Negative | 3972908 - 3974098 | 40857.8 |
| nitrogen regulatory protein p-ii 2 | NCTC13639_04319 | Not Available | Negative | 3974130 - 3974468 | 12173.8 |
| putative multidrug transporter membrane-atp-binding components | NCTC13639_04320 | Not Available | Negative | 3974725 - 3976503 | 64953.3 |
| abc transporter atp-binding protein/permease | NCTC13639_04321 | Not Available | Negative | 3976496 - 3978268 | 66131.7 |
| transcriptional regulator | NCTC13639_04322 | Not Available | Negative | 3978313 - 3978771 | 17297.1 |
| lyase | NCTC13639_04323 | Not Available | Positive | 3978888 - 3979943 | 39105.4 |
| hydrolase | NCTC13639_04324 | Not Available | Negative | 3979994 - 3980812 | 30202.4 |
| substrate-binding protein | NCTC13639_04325 | Not Available | Positive | 3980952 - 3982739 | 68014.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

