Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro)/cys-trna(cys) deacylase ybak | NCTC13639_04284 | Not Available | Positive | 3936614 - 3937093 | 17143.9 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase periplasmic precursor | NCTC13639_04285 | Not Available | Negative | 3937201 - 3938853 | 60634.2 |
| fosmidomycin resistance protein | NCTC13639_04286 | Not Available | Positive | 3939028 - 3940248 | 43296.2 |
| putative cation:proton antiport protein | NCTC13639_04287 | Not Available | Positive | 3940474 - 3942153 | 59627.6 |
| inosine-guanosine kinase | NCTC13639_04288 | Not Available | Negative | 3942245 - 3943549 | 48192.2 |
| acetyl esterase | NCTC13639_04289 | Not Available | Positive | 3943702 - 3944661 | 36249.1 |
| ferrochelatase | NCTC13639_04290 | Not Available | Negative | 3944658 - 3945620 | 35837.1 |
| adenylate kinase | NCTC13639_04291 | Not Available | Negative | 3945784 - 3946428 | 23490.3 |
| heat shock protein 90 | NCTC13639_04292 | Not Available | Negative | 3946661 - 3948535 | 71348.1 |
| recombination protein recr | NCTC13639_04293 | Not Available | Negative | 3948646 - 3949251 | 21881.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

