Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein ybba | NCTC13639_04263 | Not Available | Negative | 3916031 - 3916717 | 24590.5 |
| multifunctional acyl-coa thioesterase i and protease i and lysophospholipase l1 | NCTC13639_04264 | Not Available | Positive | 3916811 - 3917311 | 18747.4 |
| short chain dehydrogenase | NCTC13639_04265 | Not Available | Positive | 3917340 - 3918110 | 28049.2 |
| thioredoxin-like protein | NCTC13639_04266 | Not Available | Positive | 3918169 - 3919023 | 31679.6 |
| abc-type uncharacterized transport system, permease component | NCTC13639_04267 | Not Available | Negative | 3919102 - 3919881 | 28304.6 |
| putative abc transporter atp-binding protein ybbl | NCTC13639_04268 | Not Available | Negative | 3919868 - 3920545 | 25440.4 |
| ftsh protease regulator hflk | NCTC13639_04269 | Not Available | Positive | 3920679 - 3921596 | 33718.1 |
| inner membrane protein ybbj | NCTC13639_04270 | Not Available | Positive | 3921593 - 3922051 | 16714.6 |
| uncharacterised protein | NCTC13639_04271 | Not Available | Positive | 3922071 - 3924215 | 80051.6 |
| protein of uncharacterised function (duf3142) | NCTC13639_04272 | Not Available | Positive | 3924185 - 3924901 | 26537.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

