Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 3 catalytic subunit | NCTC13639_04253 | Not Available | Negative | 3903902 - 3905683 | 64930.8 |
| transcriptional repressor iclr | NCTC13639_04254 | Not Available | Negative | 3905768 - 3906589 | 29488.6 |
| ureidoglycolate hydrolase | NCTC13639_04255 | Not Available | Negative | 3906665 - 3907147 | 18131.5 |
| lysr family transcriptional regulator | NCTC13639_04256 | Not Available | Positive | 3907375 - 3908301 | 34080.0 |
| trna 2-selenouridine synthase | NCTC13639_04257 | Not Available | Positive | 3908371 - 3909465 | 41289.3 |
| abc transporter | NCTC13639_04258 | Not Available | Negative | 3909466 - 3910125 | 23729.8 |
| abc transporter atp-binding protein | NCTC13639_04259 | Not Available | Negative | 3910118 - 3911134 | 36441.5 |
| dl-methionine transporter substrate-binding subunit | NCTC13639_04260 | Not Available | Negative | 3911198 - 3912028 | 29925.1 |
| outer membrane protein (porin) | NCTC13639_04261 | Not Available | Negative | 3912298 - 3913431 | 42551.3 |
| permease | NCTC13639_04262 | Not Available | Negative | 3913620 - 3916034 | 89249.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

