Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate dehydrogenase | NCTC13639_04242 | Not Available | Positive | 3892113 - 3893162 | 37892.3 |
| allantoate amidohydrolase | NCTC13639_04243 | Not Available | Positive | 3893184 - 3894419 | 45660.2 |
| uncharacterized conserved protein, contains double-stranded beta-helix domain | NCTC13639_04244 | Not Available | Positive | 3894430 - 3895215 | 28765.0 |
| glycerate kinase i | NCTC13639_04246 | Not Available | Negative | 3895296 - 3896444 | 39165.8 |
| putative purine permease ybby | NCTC13639_04247 | Not Available | Negative | 3896466 - 3897764 | 47087.4 |
| hydantoinase (amidohydrolase) | NCTC13639_04248 | Not Available | Negative | 3897823 - 3899184 | 49984.9 |
| allantoin transport protein | NCTC13639_04249 | Not Available | Negative | 3899257 - 3900717 | 52524.4 |
| major facilitator superfamily transporter | NCTC13639_04250 | Not Available | Negative | 3900815 - 3902137 | 46893.5 |
| tartronate semialdehyde reductase | NCTC13639_04251 | Not Available | Negative | 3902134 - 3903012 | 30864.6 |
| hydroxypyruvate isomerase | NCTC13639_04252 | Not Available | Negative | 3903113 - 3903889 | 29206.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

