Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fimbrial protein | NCTC13639_04222 | Not Available | Negative | 3874053 - 3874466 | 14366.9 |
| fimbrial-like adhesin | NCTC13639_04223 | Not Available | Negative | 3874581 - 3875588 | 36330.1 |
| fimbrial usher protein fimd | NCTC13639_04224 | Not Available | Negative | 3875593 - 3878214 | 95497.5 |
| fimbrial chaperone protein fimc | NCTC13639_04225 | Not Available | Negative | 3878222 - 3878914 | 25083.4 |
| fimbrial subunit fimi | NCTC13639_04226 | Not Available | Negative | 3878956 - 3879489 | 18979.8 |
| fimbrial major subunit fima | NCTC13639_04227 | Not Available | Negative | 3879567 - 3880121 | 18649.8 |
| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase | NCTC13639_04228 | Not Available | Positive | 3880691 - 3881557 | 30940.6 |
| ribosome-associated protein | NCTC13639_04229 | Not Available | Positive | 3881559 - 3881771 | 7434.06 |
| inner membrane protein ybci | NCTC13639_04230 | Not Available | Positive | 3881897 - 3882421 | 19527.6 |
| cysteinyl-trna synthetase | NCTC13639_04231 | Not Available | Negative | 3882513 - 3883898 | 52114.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

