Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type protein | NCTC13639_04212 | Not Available | Negative | 3864859 - 3866037 | 43962.2 |
| two-component response regulator | NCTC13639_04213 | Not Available | Positive | 3866169 - 3866861 | 26320.9 |
| periplasmic protein tort precursor | NCTC13639_04214 | Not Available | Negative | 3866834 - 3867865 | 37670.7 |
| sensor protein tors | NCTC13639_04215 | Not Available | Positive | 3867993 - 3868505 | 18475.9 |
| hybrid sensory histidine kinase bara | NCTC13639_04216 | Not Available | Positive | 3868555 - 3870714 | 80188.2 |
| Trna-arg | Not Available | Not Available | Positive | 3870752 - 3870828 | Not Available |
| uncharacterised protein | NCTC13639_04218 | Not Available | Negative | 3870901 - 3871047 | 5469.82 |
| fimbriae regulatory protein fimw | NCTC13639_04219 | Not Available | Positive | 3871082 - 3871675 | 23239.4 |
| uncharacterised protein | NCTC13639_04220 | Not Available | Positive | 3872061 - 3872783 | 28348.6 |
| transcriptional regulator fimz | NCTC13639_04221 | Not Available | Positive | 3873371 - 3874003 | 23625.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

