Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ykgb | NCTC13639_04191 | Not Available | Negative | 3842402 - 3842962 | 20751.6 |
| protein of uncharacterised function (duf1471) | NCTC13639_04192 | Not Available | Negative | 3842974 - 3843210 | 8371.24 |
| dihydrolipoamide dehydrogenase | NCTC13639_04193 | Not Available | Negative | 3843366 - 3844133 | 27902.6 |
| soluble pyridine nucleotide transhydrogenase | NCTC13639_04194 | Not Available | Negative | 3844102 - 3844692 | 21161.3 |
| dna-binding transcriptional regulator soxs | NCTC13639_04195 | Not Available | Positive | 3844929 - 3845783 | 31477.2 |
| multidrug efflux system subunit mdtc | NCTC13639_04196 | Not Available | Negative | 3845835 - 3846716 | 32357.3 |
| aminoglycoside/multidrug efflux system | NCTC13639_04197 | Not Available | Negative | 3846793 - 3848979 | 79535.3 |
| copper/silver efflux system membrane fusion protein cusb | NCTC13639_04198 | Not Available | Negative | 3848991 - 3850283 | 47131.6 |
| periplasmic copper-binding protein | NCTC13639_04199 | Not Available | Negative | 3850360 - 3850707 | 12778.5 |
| dna-binding transcriptional activator cusr | NCTC13639_04201 | Not Available | Positive | 3852318 - 3853001 | 25398.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

