Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine transporter | NCTC13639_04181 | Not Available | Negative | 3824672 - 3826111 | 52577.6 |
| gluconolactonase | NCTC13639_04182 | Not Available | Negative | 3826213 - 3827298 | 39076.9 |
| uncharacterised protein | NCTC13639_04183 | Not Available | Positive | 3827598 - 3828203 | 23035.4 |
| uncharacterised protein | NCTC13639_04184 | Not Available | Positive | 3828205 - 3828774 | 22113.6 |
| dna-binding transcriptional activator bglj | NCTC13639_04185 | Not Available | Positive | 3829391 - 3829969 | 21860.7 |
| type v secretory pathway, adhesin aida | NCTC13639_04186 | Not Available | Positive | 3830166 - 3831395 | 44527.5 |
| adhesin autotransporter | NCTC13639_04187 | Not Available | Positive | 3831358 - 3839505 | 275234.0 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | NCTC13639_04188 | Not Available | Negative | 3839658 - 3840425 | 28438.2 |
| transcriptional activator protein bglj | NCTC13639_04189 | Not Available | Negative | 3840526 - 3841107 | 22181.1 |
| predicted glycosyltransferase | NCTC13639_04190 | Not Available | Negative | 3841129 - 3841824 | 26916.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

