Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator rama | NCTC13639_04171 | Not Available | Negative | 3815305 - 3815646 | 13480.0 |
| metal-dependent hydrolase | NCTC13639_04172 | Not Available | Negative | 3815664 - 3816776 | 41673.1 |
| tetr family transcriptional regulator | NCTC13639_04173 | Not Available | Positive | 3816966 - 3817547 | 21928.0 |
| uncharacterized protein conserved in bacteria | NCTC13639_04174 | Not Available | Positive | 3817547 - 3817915 | 14086.1 |
| oxygen-insensitive nad(p)h nitroreductase | NCTC13639_04175 | Not Available | Positive | 3818035 - 3818688 | 23876.4 |
| mechanosensitive ion channel protein | NCTC13639_04176 | Not Available | Positive | 3818753 - 3819997 | 46560.3 |
| ribose operon repressor | NCTC13639_04177 | Not Available | Negative | 3820001 - 3820981 | 35354.6 |
| oxidoreductase | NCTC13639_04178 | Not Available | Negative | 3821059 - 3822210 | 42115.1 |
| inosose dehydratase | NCTC13639_04179 | Not Available | Negative | 3822207 - 3823235 | 38600.5 |
| major facilitator superfamily protein | NCTC13639_04180 | Not Available | Negative | 3823251 - 3824492 | 45283.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

