Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna,type:phe,anti_codon:gaa; | Not Available | Not Available | Positive | 3072536 - 3072611 | Not Available |
| Transposase insc | NCTC13639_03360 | Not Available | Positive | 3073193 - 3073588 | 14676.9 |
| Insertion element is2 transposase insd | NCTC13639_03361 | Not Available | Positive | 3073546 - 3074427 | 33390.5 |
| Putative nhn endonuclease | NCTC13639_03362 | Not Available | Negative | 3074462 - 3074728 | 10300.5 |
| Bacteriophage antiterminator protein q | NCTC13639_03363 | Not Available | Negative | 3074728 - 3075411 | 25465.4 |
| Conserved hypothetical bacteriophage protein | NCTC13639_03364 | Not Available | Negative | 3075411 - 3075548 | 5488.86 |
| Holliday junction resolvase rusa | NCTC13639_03365 | Not Available | Negative | 3075545 - 3075907 | 14070.9 |
| Hypothetical protein | NCTC13639_03366 | Not Available | Negative | 3075904 - 3076194 | 10349.7 |
| Ninb protein | NCTC13639_03367 | Not Available | Negative | 3076350 - 3076799 | 17490.2 |
| uncharacterised protein | NCTC13639_03368 | Not Available | Negative | 3076999 - 3077253 | 9872.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

