Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit beta | NCTC13639_04119 | Not Available | Positive | 3762769 - 3763677 | 33073.6 |
| citrate lyase subunit alpha | NCTC13639_04120 | Not Available | Positive | 3763687 - 3765219 | 55000.5 |
| 2'-(5''-triphosphoribosyl)-3'-dephospho-coa:apo- citrate lyase | NCTC13639_04121 | Not Available | Positive | 3765223 - 3765777 | 20257.3 |
| triphosphoribosyl-dephospho-coa synthase | NCTC13639_04122 | Not Available | Positive | 3765746 - 3766651 | 32978.7 |
| citrate carrier | NCTC13639_04123 | Not Available | Positive | 3766677 - 3767480 | 29528.7 |
| citrate carrier | NCTC13639_04124 | Not Available | Positive | 3767437 - 3767919 | 17425.5 |
| citrate carrier | NCTC13639_04125 | Not Available | Positive | 3767891 - 3768142 | 8925.62 |
| ribonuclease i | NCTC13639_04126 | Not Available | Positive | 3768253 - 3768846 | 21804.8 |
| flavin reductase like domain | NCTC13639_04127 | Not Available | Negative | 3769151 - 3769726 | 21038.6 |
| pyrimidine utilization protein d | NCTC13639_04128 | Not Available | Negative | 3769823 - 3770653 | 30464.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

