Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | NCTC13639_04098 | Not Available | Positive | 3746240 - 3746458 | 8342.26 |
| penicillin-binding protein 2 | NCTC13639_04099 | Not Available | Positive | 3746508 - 3747464 | 35571.1 |
| penicillin-binding protein 2 | NCTC13639_04100 | Not Available | Positive | 3747461 - 3748141 | 24804.8 |
| cell wall shape-determining protein | NCTC13639_04101 | Not Available | Positive | 3748144 - 3749256 | 40537.6 |
| rare lipoprotein a | NCTC13639_04102 | Not Available | Positive | 3749267 - 3750376 | 38130.8 |
| d-alanyl-d-alanine carboxypeptidase fraction a | NCTC13639_04103 | Not Available | Positive | 3750519 - 3751730 | 44413.4 |
| uncharacterized conserved protein | NCTC13639_04104 | Not Available | Positive | 3751837 - 3752100 | 9786.82 |
| lipoate-protein ligase b | NCTC13639_04105 | Not Available | Positive | 3752215 - 3752856 | 23725.7 |
| lipoyl synthase | NCTC13639_04106 | Not Available | Positive | 3753063 - 3753515 | 16654.5 |
| lipoyl synthase | NCTC13639_04107 | Not Available | Positive | 3753487 - 3754029 | 20263.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

