Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside hydrolase 1 | NCTC13639_04088 | Not Available | Positive | 3736769 - 3737704 | 34051.2 |
| protein of uncharacterised function (duf1451) | NCTC13639_04089 | Not Available | Negative | 3737801 - 3738283 | 18727.1 |
| leucyl-trna synthetase | NCTC13639_04090 | Not Available | Positive | 3738519 - 3741101 | 97252.9 |
| rare lipoprotein b | NCTC13639_04091 | Not Available | Positive | 3741116 - 3741715 | 21400.7 |
| dna polymerase iii subunit delta | NCTC13639_04092 | Not Available | Positive | 3741715 - 3742746 | 38544.7 |
| nicotinic acid mononucleotide adenylyltransferase | NCTC13639_04093 | Not Available | Positive | 3742739 - 3743389 | 24805.7 |
| threonine-phosphate decarboxylase | NCTC13639_04094 | Not Available | Negative | 3743364 - 3744458 | 40826.8 |
| alpha-ribazole-5'-phosphate phosphatase | NCTC13639_04095 | Not Available | Positive | 3744555 - 3745166 | 23233.7 |
| ribosome-associated protein | NCTC13639_04096 | Not Available | Positive | 3745421 - 3745738 | 11625.0 |
| rrna large subunit methyltransferase | NCTC13639_04097 | Not Available | Positive | 3745742 - 3746209 | 17372.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

