Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | NCTC13639_04077 | Not Available | Negative | 3725959 - 3727134 | 42867.8 |
| (dimethylallyl)adenosine trna methylthiotransferase | NCTC13639_04078 | Not Available | Positive | 3727320 - 3728711 | 52226.3 |
| phoh-like protein | NCTC13639_04079 | Not Available | Positive | 3728918 - 3729964 | 39226.1 |
| putative metalloprotease | NCTC13639_04080 | Not Available | Positive | 3729961 - 3730434 | 17708.8 |
| magnesium and cobalt efflux protein | NCTC13639_04081 | Not Available | Positive | 3730593 - 3731471 | 33424.6 |
| apolipoprotein n-acyltransferase | NCTC13639_04082 | Not Available | Positive | 3731496 - 3733034 | 57484.6 |
| glutamate/aspartate abc transporter permease | NCTC13639_04084 | Not Available | Positive | 3734512 - 3735252 | 27431.1 |
| glutamate/aspartate abc transporter permease | NCTC13639_04085 | Not Available | Positive | 3735252 - 3735926 | 24843.1 |
| glutamate/aspartate abc transporter atp-binding protein | NCTC13639_04086 | Not Available | Positive | 3735926 - 3736108 | 6468.81 |
| glutamate/aspartate abc transporter atp-binding protein | NCTC13639_04087 | Not Available | Positive | 3736065 - 3736652 | 21813.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

