Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | NCTC13639_03348 | Not Available | Negative | 3067668 - 3068915 | 47684.6 |
| Hypothetical protein | NCTC13639_03349 | Not Available | Negative | 3068912 - 3069367 | 16899.4 |
| Putative transposase | NCTC13639_03350 | Not Available | Negative | 3069399 - 3070037 | 24037.4 |
| uncharacterised protein | NCTC13639_03351 | Not Available | Negative | 3070049 - 3070195 | 5454.88 |
| Hypothetical protein | NCTC13639_03352 | Not Available | Negative | 3070199 - 3070417 | 8009.35 |
| Gp63 | NCTC13639_03353 | Not Available | Negative | 3070574 - 3070957 | 14521.9 |
| Lysis protein | NCTC13639_03354 | Not Available | Negative | 3071015 - 3071500 | 17662.2 |
| Lysin | NCTC13639_03355 | Not Available | Negative | 3071497 - 3071973 | 17516.7 |
| Holin protein | NCTC13639_03356 | Not Available | Negative | 3071960 - 3072277 | 11316.0 |
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | Positive | 3072456 - 3072530 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

