Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC13639_04057 | Not Available | Negative | 3711828 - 3712133 | 11143.0 |
| outer membrane porin, oprd family | NCTC13639_04058 | Not Available | Negative | 3712211 - 3713617 | 52710.7 |
| glutaminyl-trna synthetase | NCTC13639_04059 | Not Available | Negative | 3714054 - 3715721 | 63567.3 |
| pts system n-acetyl glucosamine specific transporter subunits iiabc | NCTC13639_04060 | Not Available | Negative | 3715908 - 3717857 | 68047.7 |
| glucosamine-6-phosphate deaminase | NCTC13639_04061 | Not Available | Positive | 3718200 - 3718922 | 26565.9 |
| n-acetylglucosamine-6-phosphate deacetylase | NCTC13639_04062 | Not Available | Positive | 3719284 - 3719619 | 12271.6 |
| n-acetylglucosamine-6-phosphate deacetylase | NCTC13639_04063 | Not Available | Positive | 3719585 - 3720211 | 22095.8 |
| n-acetylglucosamine repressor | NCTC13639_04064 | Not Available | Positive | 3720220 - 3720828 | 22429.2 |
| n-acetylglucosamine repressor | NCTC13639_04065 | Not Available | Positive | 3720794 - 3721441 | 23256.3 |
| ump phosphatase | NCTC13639_04066 | Not Available | Positive | 3721608 - 3722039 | 15926.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

