Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrrolidone-carboxylate peptidase | NCTC13639_04027 | Not Available | Negative | 3682460 - 3683104 | 22106.7 |
| protein of uncharacterised function (duf979) | NCTC13639_04028 | Not Available | Negative | 3683114 - 3684109 | 35680.7 |
| protein of uncharacterised function (duf969) | NCTC13639_04029 | Not Available | Negative | 3684106 - 3684828 | 25878.3 |
| lamb/ycsf family protein | NCTC13639_04030 | Not Available | Negative | 3684882 - 3685616 | 25701.5 |
| allophanate hydrolase subunit 2 | NCTC13639_04031 | Not Available | Negative | 3685606 - 3686538 | 34265.2 |
| allophanate hydrolase subunit 1 | NCTC13639_04032 | Not Available | Negative | 3686532 - 3687188 | 24145.1 |
| putative hydrolase-oxidase | NCTC13639_04033 | Not Available | Negative | 3687204 - 3687947 | 27028.1 |
| oligopeptide transporter | NCTC13639_04034 | Not Available | Positive | 3688237 - 3689718 | 53930.0 |
| transposase | NCTC13639_04035 | Not Available | Negative | 3689797 - 3690684 | 33889.1 |
| deoxyribodipyrimidine photolyase | NCTC13639_04036 | Not Available | Negative | 3690845 - 3692263 | 53618.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

