Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase cytochrome b556 large membrane subunit | NCTC13639_04017 | Not Available | Negative | 3675080 - 3675484 | 14901.9 |
| type ii citrate synthase | NCTC13639_04018 | Not Available | Positive | 3676182 - 3677465 | 48096.8 |
| hcp family t6ss protein ctsh2 | NCTC13639_04019 | Not Available | Positive | 3677681 - 3679198 | 56289.1 |
| uncharacterised protein | NCTC13639_04020 | Not Available | Positive | 3679158 - 3679325 | 6342.65 |
| uncharacterised protein | NCTC13639_04021 | Not Available | Positive | 3679322 - 3679660 | 13026.4 |
| colicin immunity protein / pyocin immunity protein | NCTC13639_04022 | Not Available | Positive | 3679722 - 3679865 | 5779.73 |
| uncharacterized protein conserved in bacteria | NCTC13639_04023 | Not Available | Positive | 3679946 - 3680485 | 20266.4 |
| ammonia monooxygenase | NCTC13639_04024 | Not Available | Positive | 3680608 - 3681546 | 33697.9 |
| endonuclease viii | NCTC13639_04025 | Not Available | Negative | 3681653 - 3681871 | 8292.87 |
| endonuclease viii | NCTC13639_04026 | Not Available | Negative | 3681834 - 3682445 | 22572.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

