Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | NCTC13639_04007 | Not Available | Negative | 3662478 - 3663380 | 34456.6 |
| siroheme synthase | NCTC13639_04008 | Not Available | Positive | 3663786 - 3664574 | 28384.6 |
| pdu/cob regulatory protein pocr | NCTC13639_04009 | Not Available | Negative | 3664553 - 3665446 | 34286.1 |
| succinyl-coa synthetase subunit alpha | NCTC13639_04010 | Not Available | Negative | 3665672 - 3666541 | 29807.3 |
| succinyl-coa synthetase subunit beta | NCTC13639_04011 | Not Available | Negative | 3666541 - 3667707 | 41388.0 |
| dihydrolipoamide succinyltransferase | NCTC13639_04012 | Not Available | Negative | 3667798 - 3669021 | 44254.2 |
| 2-oxoglutarate dehydrogenase e1 | NCTC13639_04013 | Not Available | Negative | 3669036 - 3671837 | 104735.0 |
| succinate dehydrogenase iron-sulfur subunit | NCTC13639_04014 | Not Available | Negative | 3672241 - 3672957 | 26734.4 |
| succinate dehydrogenase flavoprotein subunit | NCTC13639_04015 | Not Available | Negative | 3672973 - 3674739 | 64338.5 |
| succinate dehydrogenase cytochrome b556 small membrane subunit | NCTC13639_04016 | Not Available | Negative | 3674739 - 3675086 | 12796.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

