Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translocation protein tolb | NCTC13639_03987 | Not Available | Negative | 3641260 - 3642552 | 46034.2 |
| colicin import protein | NCTC13639_03988 | Not Available | Negative | 3642681 - 3643937 | 42560.6 |
| colicin uptake protein tolr | NCTC13639_03989 | Not Available | Negative | 3644002 - 3644430 | 15441.9 |
| colicin import protein | NCTC13639_03990 | Not Available | Negative | 3644434 - 3645126 | 25572.2 |
| acyl-coa thioester hydrolase | NCTC13639_03991 | Not Available | Negative | 3645123 - 3645527 | 15556.9 |
| cyd operon protein ybge | NCTC13639_03992 | Not Available | Negative | 3645678 - 3645971 | 10990.9 |
| predicted outer membrane lipoprotein | NCTC13639_03993 | Not Available | Negative | 3645971 - 3646084 | 4013.84 |
| cytochrome d ubiquinol oxidase subunit 2 | NCTC13639_03994 | Not Available | Negative | 3646099 - 3647238 | 42286.4 |
| cytochrome d ubiquinol oxidase subunit 1 | NCTC13639_03995 | Not Available | Negative | 3647254 - 3648822 | 58385.6 |
| transposase dde domain | NCTC13639_03996 | Not Available | Negative | 3649852 - 3650832 | 37830.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

