Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family protein | NCTC13639_03916 | Not Available | Negative | 3575490 - 3576458 | 35111.8 |
| atp-dependent dna helicase ding | NCTC13639_03917 | Not Available | Negative | 3576488 - 3577663 | 44830.9 |
| atp-dependent dna helicase ding | NCTC13639_03918 | Not Available | Negative | 3577713 - 3578639 | 33818.4 |
| sodium:sulfate symporter | NCTC13639_03919 | Not Available | Negative | 3578794 - 3580215 | 50017.4 |
| 3-carboxy-cis,cis-muconate cycloisomerase | NCTC13639_03920 | Not Available | Negative | 3580249 - 3581601 | 49109.4 |
| histidine utilization repressor | NCTC13639_03921 | Not Available | Positive | 3581906 - 3582538 | 23588.3 |
| atp-dependent rna helicase rhle | NCTC13639_03922 | Not Available | Negative | 3582607 - 3583062 | 16188.3 |
| atp-dependent rna helicase rhle | NCTC13639_03923 | Not Available | Negative | 3583053 - 3583952 | 33517.8 |
| putative dna-binding transcriptional regulator | NCTC13639_03924 | Not Available | Positive | 3584174 - 3584779 | 22377.0 |
| membrane fusion protein of a type i secretion system | NCTC13639_03925 | Not Available | Positive | 3584847 - 3585842 | 36302.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

