Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese transport regulator mntr | NCTC13639_03896 | Not Available | Negative | 3558281 - 3558754 | 17809.4 |
| uncharacterised protein | NCTC13639_03897 | Not Available | Positive | 3558941 - 3559069 | 5001.25 |
| phosphoethanolamine transferase | NCTC13639_03898 | Not Available | Positive | 3559346 - 3560932 | 59889.5 |
| outer membrane protein x | NCTC13639_03899 | Not Available | Negative | 3560997 - 3561512 | 18307.1 |
| threonine and homoserine efflux system | NCTC13639_03900 | Not Available | Positive | 3561866 - 3562753 | 31125.2 |
| uncharacterised protein | NCTC13639_03901 | Not Available | Negative | 3562691 - 3562858 | 6961.69 |
| dna starvation/stationary phase protection protein dps | NCTC13639_03902 | Not Available | Positive | 3563056 - 3563559 | 18647.2 |
| glutamine abc transporter periplasmic protein | NCTC13639_03903 | Not Available | Positive | 3563925 - 3564671 | 27177.5 |
| glutamine abc transporter permease protein | NCTC13639_03904 | Not Available | Positive | 3564809 - 3565468 | 24143.5 |
| glutamine abc transporter atp-binding protein | NCTC13639_03905 | Not Available | Positive | 3565465 - 3566187 | 26748.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

