Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin biosynthesis protein moea | NCTC13639_03886 | Not Available | Positive | 3545587 - 3546822 | 44039.9 |
| molybdopterin biosynthesis protein moeb | NCTC13639_03887 | Not Available | Positive | 3546822 - 3547571 | 27020.9 |
| fructose-6-phosphate aldolase | NCTC13639_03888 | Not Available | Negative | 3547658 - 3548320 | 22966.9 |
| pyruvate formate-lyase 3-activating enzyme | NCTC13639_03889 | Not Available | Positive | 3548453 - 3549352 | 32721.4 |
| formate acetyltransferase 3 (pyruvate formate lyase 3) | NCTC13639_03890 | Not Available | Positive | 3549358 - 3551790 | 90168.5 |
| hydrolase | NCTC13639_03891 | Not Available | Positive | 3551956 - 3552771 | 30478.5 |
| protein of uncharacterised function (duf1479) | NCTC13639_03892 | Not Available | Positive | 3552925 - 3554187 | 47205.9 |
| abc transporter atp-binding protein | NCTC13639_03893 | Not Available | Negative | 3554331 - 3555926 | 59882.3 |
| peptidoglycan-binding protein | NCTC13639_03894 | Not Available | Positive | 3556090 - 3557079 | 35764.2 |
| inner membrane protein ybir | NCTC13639_03895 | Not Available | Negative | 3557139 - 3558284 | 41549.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

