Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator oxyr | NCTC13639_03866 | Not Available | Positive | 3525801 - 3526715 | 34767.2 |
| tetr family transcriptional regulator | NCTC13639_03867 | Not Available | Negative | 3526721 - 3527269 | 20906.4 |
| major facilitator superfamily protein | NCTC13639_03868 | Not Available | Positive | 3527436 - 3528563 | 38895.2 |
| hydrolase | NCTC13639_03869 | Not Available | Positive | 3528563 - 3529378 | 30534.0 |
| uncharacterised protein | NCTC13639_03870 | Not Available | Positive | 3529486 - 3529767 | 9776.86 |
| multidrug resistance protein | NCTC13639_03871 | Not Available | Negative | 3529796 - 3531028 | 44248.6 |
| undecaprenyl pyrophosphate phosphatase | NCTC13639_03872 | Not Available | Positive | 3531276 - 3531935 | 24661.8 |
| dna-binding transcriptional repressor deor | NCTC13639_03873 | Not Available | Positive | 3532000 - 3532758 | 28607.5 |
| d-alanyl-d-alanine carboxypeptidase fraction c | NCTC13639_03874 | Not Available | Negative | 3532803 - 3534005 | 43467.3 |
| glutathione s-transferase | NCTC13639_03875 | Not Available | Positive | 3534334 - 3534960 | 23482.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

