Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine transporter subunit: periplasmic-binding component of abc superfamily | NCTC13639_03855 | Not Available | Negative | 3515186 - 3516298 | 40782.7 |
| putative bacterial sensory transduction regulator | NCTC13639_03856 | Not Available | Negative | 3516732 - 3517208 | 17534.0 |
| ribosomal protein s6 modification protein | NCTC13639_03857 | Not Available | Negative | 3517299 - 3518201 | 32638.8 |
| nitroreductase a | NCTC13639_03858 | Not Available | Negative | 3518261 - 3518983 | 26763.0 |
| protein of uncharacterised function (duf1418) | NCTC13639_03859 | Not Available | Negative | 3518967 - 3519257 | 10454.3 |
| glutaredoxin 1 | NCTC13639_03860 | Not Available | Positive | 3519434 - 3519694 | 9763.62 |
| transport protein | NCTC13639_03861 | Not Available | Positive | 3520379 - 3522064 | 60132.7 |
| bicyclomycin resistance protein | NCTC13639_03863 | Not Available | Positive | 3522597 - 3523808 | 44587.4 |
| 3-ketoacyl-(acyl-carrier-protein) reductase | NCTC13639_03864 | Not Available | Positive | 3523998 - 3524771 | 26495.9 |
| uncharacterized inner membrane transporter yicl | NCTC13639_03865 | Not Available | Negative | 3524784 - 3525698 | 33327.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

