Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain NCTC13639 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1365926 bp
Thymine Count
1362255 bp
Guanine Count
1468521 bp
Cytosine Count
1463287 bp
Genome Length
5659989 bp
Protein-coding Genes
5404 genes
Non-Coding Genes
644 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | NCTC13639_03845 | Not Available | Positive | 3507141 - 3507359 | 8236.07 |
| lysr family transcriptional regulator | NCTC13639_03846 | Not Available | Negative | 3507439 - 3508350 | 33814.2 |
| quercetin 2,3-dioxygenase | NCTC13639_03847 | Not Available | Positive | 3508459 - 3509319 | 31013.6 |
| isochorismatase | NCTC13639_03848 | Not Available | Positive | 3509336 - 3510013 | 24092.9 |
| Trna-ser | Not Available | Not Available | Positive | 3510163 - 3510250 | Not Available |
| 23s rrna methyluridine methyltransferase | NCTC13639_03850 | Not Available | Negative | 3510392 - 3511519 | 42124.2 |
| inner membrane protein ybjo | NCTC13639_03851 | Not Available | Negative | 3511561 - 3512049 | 18521.2 |
| putrescine transporter subunit: membrane component of abc superfamily | NCTC13639_03852 | Not Available | Negative | 3512109 - 3512954 | 30634.5 |
| putrescine transporter subunit: membrane component of abc superfamily | NCTC13639_03853 | Not Available | Negative | 3512951 - 3513904 | 35583.7 |
| putrescine transporter atp-binding subunit | NCTC13639_03854 | Not Available | Negative | 3513914 - 3515047 | 42119.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

